2024

Mechanism of SHP2 activation by bis-Tyr-phosphorylated Gab1

Lisa Machner, Alaa Shaikhqasem, Tobias Gruber, Farzad Hamdi, Constanze Breithaupt, Judith Kniest, Felix Wiebe, Marc Lewitzky, Christoph Parthier, Fotis L. Kyrilis, Jochen Balbach, Panagiotis L. Kastritis, Stephan M. Feller, Milton T. Stubbs

bioRxiv

Posted December 23rd 2024

https://doi.org/10.1101/2024.12.23.630100

The human touch: Utilizing AlphaFold 3 to analyze structures of endogenous metabolons

Träger TK, Tüting C, Kastritis PL

Structure

Published October 3rd 2024

https://doi.org/10.1016/j.str.2024.08.018

IQD2 recruits KLCR1 to the membrane-microtubule nexus to promote cytoskeletal mechano-responsiveness in leaf epidermis pavement cells

Jonas Buhl, Sandra Klemm, Malte Kölling, Felix Ruhnow, Christian Ihling, Christian Tüting, Pradeep Dahiya, Jacqueline Patzsch, Leia Colin, Gina Stamm, Andrea Sinz, Panagiotos L. Kastritis, Staffan Persson, Katharina Bürstenbinder

bioRxiv

Posted October 1st 2024

https://doi.org/10.1101/2024.10.01.615909

Induction of oxidative- and endoplasmic-reticulum-stress dependent apoptosis in pancreatic cancer cell lines by DDOST knockdown

Richard Böhme, Andreas W. Schmidt, Nico Hesselbarth, Guido Posern, Andrea Sinz, Christian Ihling, Patrick Michl, Helmut Laumen, Jonas Rosendahl

Scientific Reports

Published September 2nd 2024

https://doi.org/10.1038/s41598-024-68510-8

APOBEC3C-mediated NF-κB activation enhances clear cell renal cell carcinoma progression

Nora Hase, Danny Misiak, Helge Taubert, Stefan Hüttelmaier, Michael Gekle, Marcel Köhn

Molecular Oncology

Published August 26th 2024

https://doi.org/10.1002/1878-0261.13721

Disorder-to-order active site capping regulates the rate-limiting step of the inositol pathway

Träger TK, Kyrilis FL, Hamdi F, Tüting C, Alfes M, Hofmann T, Schmidt C, Kastritis PL.

Proc Natl Acad Sci U S A

Published August 20th 2024

https://doi.org/10.1073/pnas.2400912121

Enhancing structural control in covalent organic frameworks through steric interaction-driven linker design

Winter A, Hamdi F, Eichhöfer A, Saalwächter K, Kastritis PL

Chem Sci.

Published August 13th 2024

https://doi.org/10.1039/d4sc03461a

Structural biology in cellulo: Minding the gap between conceptualization and realization

Kyrilis FL, Low JKK, Mackay JP, Kastritis PL.

Curr Opin Struct Biol.

Published August 2024

https://doi.org/10.1016/j.sbi.2024.102843

Evaluating Imide-Based Mass Spectrometry-Cleavable Cross-Linkers for Structural Proteomics Studies

Alessio Di Ianni, Christian H. Ihling, Tomáš Vranka, Václav Matoušek, Andrea Sinz and Claudio Iacobucci

JACS Au

Published July 16th 2024

https://doi.org/10.1021/jacsau.4c00282

A Workflow for Improved Analysis of Cross-Linking Mass Spectrometry Data Integrating Parallel Accumulation-Serial Fragmentation with MeroX and Skyline

Juan Camilo Rojas Echeverri, Frank Hause, Claudio Iacobucci, Christian H Ihling, Dirk Tänzler, Nicholas Shulman, Michael Riffle, Brendan X MacLean, Andrea Sinz

Analytical Chemistry

Published May 14th 2024

https://doi.org/10.1021/acs.analchem.4c00829

Delineating organizational principles of the endogenous L-A virus by cryo-EM and computational analysis of native cell extracts

Lisa Schmidt, Christian Tüting, Fotis L. Kyrilis, Farzad Hamdi, Dmitry A. Semchonok, Gerd Hause, Annette Meister, Christian Ihling, Milton T. Stubbs, Andrea Sinz, Panagiotis L. Kastritis

Communications Biology

Published May 10th 2024

https://doi.org/10.1038/s42003-024-06204-7

Rbfox1 controls alternative splicing of focal adhesion genes in cardiac muscle cells

Peter Zorn, Jaime Calvo Sánchez, Tala Alakhras, Barbara Schreier, Michael Gekle, Stefan Hüttelmaier, Marcel Köhn

Journal of Molecular Cell Biology
 
Published January 22nd 2024
 
 

RAVER1 hinders lethal EMT and modulates miR/RISC activity by the control of alternative splicing

Alice Wedler, Nadine Bley, Markus Glaß, Simon Müller, Laura Schian, Kingsley Benjamin Obika, Marcell Lederer, Claudia Misiak, Tommy Fuchs, Marcel Köhn, Roland Jacob, Tony Gutschner, Christian Ihling, Andrea Sinz, Stefan Hüttelmaier
 
Nucleic Acids Research
 
Published January 12th 2024
 
 

Epstein-Barr virus-driven B cell lymphoma mediated by a direct LMP1-TRAF6 complex

Fabian Giehler, Michael S. Ostertag, Thomas Sommermann, Daniel Weidl, Kai R. Sterz, Helmut Kutz, Andreas Moosmann, Stephan M. Feller, Arie Geerlof, Brigitte Biesinger, Grzegorz M. Popowicz, Johannes Kirchmair & Arnd Kieser

Nature Communications

Published January 10th 2024

https://doi.org/10.1038/s41467-023-44455-w

Protein-Rich Rafts in Hybrid Polymer/Lipid Giant Unilamellar Vesicles

Otrin N, Otrin L, Bednarz C, Träger TK, Hamdi F, Kastritis PL, Ivanov I, Sundmacher K.

Biomacromolecules
 
Published January 8th 2024
 
 

Effect of Molecular Dynamics and Internal Water Contact on the Photophysical Properties of Red pH-Sensitive Proteins

Schmitt FJ, Mehmood AS, Tüting C, Phan HT, Reisdorf J, Rieder F, Ghane Golmohamadi F, Verma R, Kastritis PL, Laufer J

Biomacromolecules

Published January 2nd 2024

https://doi.org/10.1021/acs.biochem.3c00444